MRIQC: individual bold report

Summary

  • BIDS filename: sub-03_ses-05_task-test_run-3_bold.
  • Date and time: 2021-02-08, 21:08.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0004297003745318352
aqi0.002014681086142322
dummy_trs1
dvarsnstd20.42066521755639
dvarsstd1.1076589035714282
dvarsvstd0.9977086149999996
efc0.5553788921182037
fber386.7928466796875
fdmean0.08058571483068937
fdnum0
fdperc0.0
fwhmavg2.720212
fwhmx2.5375360000000002
fwhmy2.80814
fwhmz2.8149599999999997
gcor0.0175677
gsrx0.01174852717667818
gsry0.07021553814411163
sizet267
sizex76
sizey76
sizez54
snr2.7463641070161224
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk22.89712979807244
summarybgmad113.7050208271579
summarybgmean597.95849609375
summarybgmedian294.6142272949219
summarybgn196292.0
summarybgp05207.21348571777344
summarybgp952077.270068359374
summarybgstdv834.7164916992188
summaryfgk1.3017992068280684
summaryfgmad1955.6305103102554
summaryfgmean6313.9609375
summaryfgmedian5911.80517578125
summaryfgn59211.0
summaryfgp053606.318359375
summaryfgp9510474.3896484375
summaryfgstdv2152.5751953125
tsnr79.06355956778862
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime10:49:57.967500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.99515, -0.0980734, -0.00757407, 0.0973999, 0.993219, -0.0634761]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0992346
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber20
ShimSetting[-5628, -1549, 3191, 418, -39, 132, -40, 2]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325, 0, 0.8975, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp216.294
WipMemBlock7988c157-cb63-4961-a8e1-7cba4af55dba||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum3c78bcca058bd6db3223e09108791da2
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.