MRIQC: individual bold report

Summary

  • BIDS filename: sub-03_ses-04_task-train_run-4_bold.
  • Date and time: 2021-02-08, 21:47.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0006360759493670886
aqi0.0023085694514767933
dummy_trs1
dvarsnstd19.76133032139831
dvarsstd1.0943091940254233
dvarsvstd0.9957664565677969
efc0.5514209850532814
fber413.20672607421875
fdmean0.08751745935075697
fdnum1
fdperc0.4219409282700422
fwhmavg2.650258303030303
fwhmx2.46782
fwhmy2.7397839999999998
fwhmz2.7431709090909093
gcor0.0166571
gsrx0.0114414282143116
gsry0.06543977558612823
sizet237
sizex76
sizey76
sizez54
snr2.8087894461102882
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk25.552728033524282
summarybgmad101.49257822739445
summarybgmean572.81396484375
summarybgmedian284.746826171875
summarybgn196893.0
summarybgp05205.299560546875
summarybgp951955.168701171875
summarybgstdv811.4117431640625
summaryfgk1.1833060135526994
summaryfgmad1948.4086159099568
summaryfgmean6297.53955078125
summaryfgmedian5914.77197265625
summaryfgn58621.0
summaryfgp053631.236083984375
summaryfgp9510330.826171875
summaryfgstdv2105.790283203125
tsnr74.0704235821031
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime09:42:43.565000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999775, -0.0110261, -0.0181009, 0.00994647, 0.998227, -0.0586868]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.104522
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber11
ShimSetting[-5625, -1547, 3200, 390, -4, 112, -22, 10]
SliceThickness2.5
SliceTiming[0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.215, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325, 0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.215, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp218.205
WipMemBlock7b15d6a6-35f9-4519-84f6-f28e5ca79bcb||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumb8977b8d8ecfc1b2b79552fd926f6ec6
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.