MRIQC: individual bold report

Summary

  • BIDS filename: sub-03_ses-04_task-train_run-2_bold.
  • Date and time: 2021-02-08, 21:47.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.00048459915611814337
aqi0.0023891898734177217
dummy_trs1
dvarsnstd21.558620687415246
dvarsstd1.1333742565254235
dvarsvstd0.9961400260169496
efc0.5506955507530272
fber417.4041748046875
fdmean0.07180794926259443
fdnum4
fdperc1.6877637130801688
fwhmavg2.63420303030303
fwhmx2.45534
fwhmy2.73208
fwhmz2.715189090909091
gcor0.0172771
gsrx0.011652746237814426
gsry0.06573457270860672
sizet237
sizex76
sizey76
sizez54
snr2.8244003116846708
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk26.623761680372713
summarybgmad100.1131808325098
summarybgmean564.5584716796875
summarybgmedian282.0906982421875
summarybgn197048.0
summarybgp05204.09850997924804
summarybgp951924.6859741210933
summarybgstdv802.775390625
summaryfgk1.2056996280111631
summaryfgmad1919.494253014775
summaryfgmean6264.0693359375
summaryfgmedian5882.77197265625
summaryfgn58611.0
summaryfgp053630.74462890625
summaryfgp9510243.40869140625
summaryfgstdv2082.821533203125
tsnr74.0866645378992
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime09:26:30.742500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999775, -0.0110261, -0.0181009, 0.00994647, 0.998227, -0.0586868]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.104522
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber9
ShimSetting[-5625, -1547, 3200, 390, -4, 112, -22, 10]
SliceThickness2.5
SliceTiming[0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325, 0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp218.205
WipMemBlock598c09f1-4cb7-498c-a90e-b88ff4db8b3a||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumf900fd95e10a6d48d1ac849e8767055c
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.