MRIQC: individual bold report

Summary

  • BIDS filename: sub-03_ses-04_task-test_run-1_bold.
  • Date and time: 2021-02-08, 21:47.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.00044376865671641794
aqi0.002289939365671642
dummy_trs0
dvarsnstd21.990751002359545
dvarsstd1.137185025805244
dvarsvstd0.9852371997378283
efc0.549613221990189
fber424.359375
fdmean0.06784912524135092
fdnum1
fdperc0.373134328358209
fwhmavg2.626938787878788
fwhmx2.4476120000000003
fwhmy2.722048
fwhmz2.7111563636363636
gcor0.0150439
gsrx0.011583582498133183
gsry0.06613336503505707
sizet268
sizex76
sizey76
sizez54
snr2.8381012153762315
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk28.013005416281793
summarybgmad97.1270503845715
summarybgmean556.5402221679688
summarybgmedian279.03729248046875
summarybgn197229.0
summarybgp05203.04476928710938
summarybgp951884.4880126953076
summarybgstdv795.8345336914062
summaryfgk1.1812887926498723
summaryfgmad1904.739899589305
summaryfgmean6247.77392578125
summaryfgmedian5866.7275390625
summaryfgn58515.0
summaryfgp053635.339379882813
summaryfgp9510198.06259765625
summaryfgstdv2067.113525390625
tsnr74.89588058693334
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime09:17:44.032500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999775, -0.0110261, -0.0181009, 0.00994647, 0.998227, -0.0586868]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.104562
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber8
ShimSetting[-5625, -1547, 3200, 390, -4, 112, -22, 10]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp218.205
WipMemBlockc485360c-03ac-4248-9bb8-5c2bbb283d85||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum31b4d10b0d8d9fb85e27c7bb2879a219
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.