MRIQC: individual bold report

Summary

  • BIDS filename: sub-03_ses-03_task-test_run-1_bold.
  • Date and time: 2021-02-08, 22:22.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.005504157303370786
aqi0.0036400600374531834
dummy_trs1
dvarsnstd21.134142051015033
dvarsstd1.1650233077443606
dvarsvstd1.0570389035338348
efc0.5554721242309121
fber407.4145812988281
fdmean0.08584789059205909
fdnum11
fdperc4.119850187265918
fwhmavg2.5289494545454545
fwhmx2.336456
fwhmy2.659036
fwhmz2.5913563636363635
gcor0.0171716
gsrx0.012224672362208366
gsry0.06410753726959229
sizet267
sizex76
sizey76
sizez54
snr3.0603714379061526
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk27.435770546765504
summarybgmad93.92032584738992
summarybgmean542.9251708984375
summarybgmedian275.55804443359375
summarybgn197009.0
summarybgp05201.71160888671875
summarybgp951859.0659423828083
summarybgstdv757.2024536132812
summaryfgk1.1128833260612367
summaryfgmad1707.033301112481
summaryfgmean5961.81591796875
summaryfgmedian5653.62353515625
summaryfgn58524.0
summaryfgp053582.366064453125
summaryfgp959441.130664062497
summaryfgstdv1847.349365234375
tsnr67.70489247702062
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime09:25:16.870000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.998761, -0.0466397, 0.0173722, 0.0464016, 0.998827, 0.0138687]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.102016
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber10
ShimSetting[-5623, -1574, 3197, 479, -16, 61, 9, -3]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.835, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.835]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp218.008
WipMemBlock9c228086-ee8e-4d6b-859a-40c8bd523136||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5suma6a10b0b7fdf13f4008fedf7f51ff048
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.