MRIQC: individual bold report

Summary

  • BIDS filename: sub-03_ses-02_task-train_run-3_bold.
  • Date and time: 2021-02-08, 22:44.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0007086134453781512
aqi0.002206568571428572
dummy_trs0
dvarsnstd20.97941534620253
dvarsstd1.1399450550210968
dvarsvstd1.0081543302953586
efc0.5552889773823746
fber401.8489990234375
fdmean0.05532913271626051
fdnum0
fdperc0.0
fwhmavg2.5895259393939396
fwhmx2.413628
fwhmy2.7199280000000003
fwhmz2.6350218181818184
gcor0.00986499
gsrx0.011150874197483063
gsry0.06603450328111649
sizet238
sizex76
sizey76
sizez54
snr2.896489835331317
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk25.319946191998746
summarybgmad103.58594849239685
summarybgmean582.57470703125
summarybgmedian286.0609436035156
summarybgn196918.0
summarybgp05205.80673217773438
summarybgp952021.0293395996066
summarybgstdv827.2039794921875
summaryfgk1.151092370057949
summaryfgmad1863.419240053674
summaryfgmean6210.52197265625
summaryfgmedian5856.5693359375
summaryfgn58518.0
summaryfgp053625.5936889648438
summaryfgp9510034.19375
summaryfgstdv2021.936767578125
tsnr76.87377601861954
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime09:35:24.792500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999407, 0.0134041, 0.0317299, -0.0116872, 0.998489, -0.053688]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMIT
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.09708
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber10
ShimSetting[-5622, -1549, 3200, 454, -51, 109, -12, 6]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.3225, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.835, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.3225, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.835]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp214.947
WipMemBlock7102af14-0fee-4eb8-80af-aea740e56789||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum06c0f36be939443aed2dca06831ea935
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.