MRIQC: individual bold report

Summary

  • BIDS filename: sub-01_ses-05_task-train_run-7_bold.
  • Date and time: 2021-02-09, 02:19.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0006438559322033897
aqi0.002603531313559322
dummy_trs2
dvarsnstd25.638966929702136
dvarsstd1.2411964952765953
dvarsvstd0.9971082328936172
efc0.560382118460156
fber373.160400390625
fdmean0.09848794456106033
fdnum8
fdperc3.389830508474576
fwhmavg2.529170181818182
fwhmx2.349228
fwhmy2.7027080000000003
fwhmz2.5355745454545455
gcor0.0198215
gsrx0.008808499202132225
gsry0.06848330050706863
sizet236
sizex76
sizey76
sizez54
snr3.130623304471381
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk24.008668825569465
summarybgmad91.51297492762313
summarybgmean546.6337890625
summarybgmedian275.4110107421875
summarybgn199356.0
summarybgp05204.6864471435547
summarybgp951878.4078063964844
summarybgstdv691.5066528320312
summaryfgk0.9581052652088209
summaryfgmad1615.3139391603304
summaryfgmean5748.27099609375
summaryfgmedian5465.72900390625
summaryfgn54933.0
summaryfgp053438.3458496093754
summaryfgp959024.9576171875
summaryfgstdv1745.875732421875
tsnr73.87515128892846
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime10:13:14.140000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.995653, -0.0793312, -0.0487943, 0.0769609, 0.995845, -0.0486765]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0912674
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber15
ShimSetting[-5637, -1528, 3166, 666, -48, -41, 84, 9]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325, 0, 0.8975, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp219.891
WipMemBlockeb5afb9a-a4d5-4b64-9947-242b4ffedd54||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum6cdf1c6b0cf3b1d0d55b3308cc4f9d1e
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.