MRIQC: individual bold report

Summary

  • BIDS filename: sub-01_ses-04_task-train_run-8_bold.
  • Date and time: 2021-02-09, 03:40.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0009583544303797469
aqi0.0033543159915611813
dummy_trs1
dvarsnstd25.381926350805088
dvarsstd1.2366218069491528
dvarsvstd0.9876586702966098
efc0.5579600877782708
fber369.62298583984375
fdmean0.08733025330693642
fdnum4
fdperc1.6877637130801688
fwhmavg2.5729524848484853
fwhmx2.41534
fwhmy2.718052
fwhmz2.5854654545454547
gcor0.015832
gsrx0.007705129683017731
gsry0.07097364217042923
sizet237
sizex76
sizey76
sizez54
snr2.9708250911478142
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk21.510182352693572
summarybgmad101.78660564795594
summarybgmean563.2098999023438
summarybgmedian283.45147705078125
summarybgn199341.0
summarybgp05205.0084228515625
summarybgp951932.8184814453125
summarybgstdv712.3945922851562
summaryfgk1.109803325933152
summaryfgmad1734.056043110712
summaryfgmean5929.5673828125
summaryfgmedian5603.69580078125
summaryfgn54989.0
summaryfgp053486.036181640625
summaryfgp959517.936328124999
summaryfgstdv1886.22509765625
tsnr66.79506804049015
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime10:07:16.115000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.998995, -0.0398228, 0.0205922, 0.040997, 0.997347, -0.0601472]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0942999
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber15
ShimSetting[-5614, -1535, 3177, 669, -5, -32, 63, -3]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325, 0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp221.929
WipMemBlockdcd1d776-6f4a-4b97-951a-b682529a21cb||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumbb22f42a4e26f2dc5d6cdc7bdb7c185b
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.