MRIQC: individual bold report

Summary

  • BIDS filename: sub-01_ses-04_task-train_run-7_bold.
  • Date and time: 2021-02-09, 02:59.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0007954661016949153
aqi0.002700771779661017
dummy_trs2
dvarsnstd22.851001268468092
dvarsstd1.1653866544255325
dvarsvstd1.0009194468510643
efc0.5578293278396168
fber368.6581726074219
fdmean0.09064494077737557
fdnum8
fdperc3.389830508474576
fwhmavg2.573827393939394
fwhmx2.424004
fwhmy2.71694
fwhmz2.5805381818181816
gcor0.0163623
gsrx0.004794870503246784
gsry0.08019315451383591
sizet236
sizex76
sizey76
sizez54
snr2.969698234378915
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk26.924935039675745
summarybgmad101.96031416136529
summarybgmean578.0108032226562
summarybgmedian283.27752685546875
summarybgn200646.0
summarybgp05204.6864471435547
summarybgp951984.4565734863281
summarybgstdv772.6948852539062
summaryfgk1.1913650680709083
summaryfgmad1713.1559125690294
summaryfgmean5899.8173828125
summaryfgmedian5571.70751953125
summaryfgn54810.0
summaryfgp053474.9267456054686
summaryfgp959481.071240234372
summaryfgstdv1876.1693115234375
tsnr72.34974902775139
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime09:59:26.990000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.998995, -0.0398228, 0.0205922, 0.040997, 0.997347, -0.0601472]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0942999
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber14
ShimSetting[-5614, -1535, 3177, 669, -5, -32, 63, -3]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.3225, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.835, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.3225, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.835]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp221.929
WipMemBlock44eae259-a13b-4cea-babe-e5b17a7062ca||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumb994f6b20745c2fc8e24d00411f32887
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.