MRIQC: individual bold report

Summary

  • BIDS filename: sub-01_ses-04_task-train_run-3_bold.
  • Date and time: 2021-02-09, 03:40.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0007839240506329114
aqi0.00320416894514768
dummy_trs1
dvarsnstd24.04355532419491
dvarsstd1.174692295677966
dvarsvstd0.9915124977542373
efc0.5569889602529031
fber370.7492980957031
fdmean0.09335167001378163
fdnum7
fdperc2.9535864978902953
fwhmavg2.581292606060606
fwhmx2.432756
fwhmy2.7337800000000003
fwhmz2.5773418181818184
gcor0.0142017
gsrx0.007080984767526388
gsry0.0736575722694397
sizet237
sizex76
sizey76
sizez54
snr2.9755353585594957
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk27.702659437060554
summarybgmad99.87860590569576
summarybgmean555.9223022460938
summarybgmedian279.358642578125
summarybgn199522.0
summarybgp05202.57383728027344
summarybgp951884.9000915527333
summarybgstdv729.8567504882812
summaryfgk1.1955699451249213
summaryfgmad1692.9970831365995
summaryfgmean5857.609375
summaryfgmedian5530.14111328125
summaryfgn55114.0
summaryfgp053458.060009765625
summaryfgp959421.875146484374
summaryfgstdv1858.5196533203125
tsnr66.09999112412333
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime09:28:4.322500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.998995, -0.0398228, 0.0205922, 0.040997, 0.997347, -0.0601472]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0942999
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber10
ShimSetting[-5614, -1535, 3177, 669, -5, -32, 63, -3]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp221.929
WipMemBlock32664805-5d6e-43ca-9033-160b1d1fe348||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumea4c4347a915cd56d75dc9ce0ed1b7a2
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.