MRIQC: individual bold report

Summary

  • BIDS filename: sub-01_ses-03_task-train_run-7_bold.
  • Date and time: 2021-02-09, 03:55.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0007639662447257385
aqi0.0030120864978902956
dummy_trs1
dvarsnstd25.605460255508483
dvarsstd1.2317274372033897
dvarsvstd0.9904390990677964
efc0.5529343654743566
fber378.3250427246094
fdmean0.09317743792299737
fdnum6
fdperc2.5316455696202533
fwhmavg2.7031695757575758
fwhmx2.542824
fwhmy2.859852
fwhmz2.7068327272727273
gcor0.0158061
gsrx0.004324684385210276
gsry0.07490804046392441
sizet237
sizex76
sizey76
sizez54
snr2.7696392147844864
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk18.577664257360446
summarybgmad116.17471994813016
summarybgmean619.9332885742188
summarybgmedian300.81011962890625
summarybgn199979.0
summarybgp05209.93247985839844
summarybgp952223.52861328125
summarybgstdv803.3330078125
summaryfgk0.8446483531194948
summaryfgmad2049.869137750882
summaryfgmean6442.43359375
summaryfgmedian6054.265625
summaryfgn54629.0
summaryfgp053600.452197265625
summaryfgp9510588.909570312499
summaryfgstdv2185.920166015625
tsnr69.19600208848715
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime10:40:21.990000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.997145, -0.0504939, 0.0561371, 0.0515601, 0.998513, -0.0177099]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0962439
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber17
ShimSetting[-5604, -1535, 3202, 656, 42, -50, 137, -6]
SliceThickness2.5
SliceTiming[0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.215, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325, 0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.215, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp223.024
WipMemBlockcdb189c9-23fa-4ae8-a661-3fb5fff529af||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumc2e4921c2ef276ad2e002fe4dab9d955
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.