MRIQC: individual bold report

Summary

  • BIDS filename: sub-01_ses-03_task-train_run-1_bold.
  • Date and time: 2021-02-09, 04:20.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0012153813559322034
aqi0.0019955781779661015
dummy_trs2
dvarsnstd21.071596551361694
dvarsstd1.1483091802553183
dvarsvstd1.0066759167234047
efc0.549620651532158
fber403.7330627441406
fdmean0.07518520280038918
fdnum1
fdperc0.423728813559322
fwhmavg2.6499893333333335
fwhmx2.48488
fwhmy2.817368
fwhmz2.64772
gcor0.010434
gsrx0.003178336890414357
gsry0.08515994250774384
sizet236
sizex76
sizey76
sizez54
snr2.827344093065041
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk22.35314135344495
summarybgmad106.54006779929533
summarybgmean600.3910522460938
summarybgmedian288.22882080078125
summarybgn201564.0
summarybgp05206.11863708496094
summarybgp952144.924792480468
summarybgstdv810.882080078125
summaryfgk0.8517081023018807
summaryfgmad1971.8323555013026
summaryfgmean6320.400390625
summaryfgmedian5948.8515625
summaryfgn54372.0
summaryfgp053585.9812988281246
summaryfgp9510315.456103515624
summaryfgstdv2104.02294921875
tsnr77.94731170707382
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime09:37:20.512500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.997145, -0.0504939, 0.0561371, 0.0515601, 0.998513, -0.0177099]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0962439
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber9
ShimSetting[-5604, -1535, 3202, 656, 42, -50, 137, -6]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.3225, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.835, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.3225, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.835]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp223.024
WipMemBlockcd583f83-d5fe-420e-ad0c-7be839ecc11f||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum45ed79b83e693facd8059c25d0f8b94f
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.